Data & code

GEMINI

The GEMINI package allows users to analyze combinatorial CRISPR screens, as described in Zamanighomi et al.

GEMINI package on Github: github.com/sellerslab/gemini

GEMINI package on Bioconductor: bioconductor.org/packages/devel/bioc/html/gemini.html

CCLE

Drug sensitivity, shRNA knockdown, CRISPR-Cas9 knockout, splicing, DNA methylation, histone H3 modification, microRNA expression and reverse-phase protein array data for 1,072 cancer cell lines.

Broad Institute CCLE portal: portals.broadinstitute.org/ccle

Raw data: www.ncbi.nlm.nih.gov/sra?term=PRJNA523380

 

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