Data & code


The GEMINI package allows users to analyze combinatorial CRISPR screens, as described in Zamanighomi et al.

GEMINI package on Github:

GEMINI package on Bioconductor:


Drug sensitivity, shRNA knockdown, CRISPR-Cas9 knockout, splicing, DNA methylation, histone H3 modification, microRNA expression and reverse-phase protein array data for 1,072 cancer cell lines.

Broad Institute CCLE portal:

Raw data:

Gene expression data

from Sing et al., Cancer Cell (2002)

GEO link:

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